Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC104596.2-201ENST00000512793 793 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 API5-211ENST00000534695 560 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC123567.1-201ENST00000548294 1261 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 CHCHD2P3-201ENST00000603038 451 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AP002414.2-201ENST00000591780 3365 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC093525.8-201ENST00000624099 1342 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 REXO1L2P-201ENST00000425429 2069 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC087499.6-201ENST00000411576 835 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AL442647.2-201ENST00000429864 857 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AL353779.1-201ENST00000434793 351 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC120045.2-201ENST00000567334 178 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AC007431.3-201ENST00000623221 587 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 AL138799.1-201ENST00000448213 1675 ntBASIC13.69□□□□□ -0.22
TRAF3IP2O43734 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRAF3IP2O43734 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms