Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.34■□□□□ 0.05
LDB2O43679 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.34■□□□□ 0.05
LDB2O43679 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LDB2O43679 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.34■□□□□ 0.05
LDB2O43679 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.34■□□□□ 0.05
LDB2O43679 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LDB2O43679 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
LDB2O43679 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LDB2O43679 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LDB2O43679 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
LDB2O43679 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LDB2O43679 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LDB2O43679 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.33■□□□□ 0.05
LDB2O43679 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.33■□□□□ 0.04
LDB2O43679 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.33■□□□□ 0.04
LDB2O43679 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LDB2O43679 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.33■□□□□ 0.04
LDB2O43679 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.33■□□□□ 0.04
LDB2O43679 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 AL645937.2-201ENST00000396808 931 ntBASIC15.33■□□□□ 0.04
LDB2O43679 C1QBPP1-201ENST00000400117 770 ntBASIC15.33■□□□□ 0.04
LDB2O43679 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.33■□□□□ 0.04
LDB2O43679 HLA-K-203ENST00000430151 1046 ntBASIC15.33■□□□□ 0.04
LDB2O43679 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.33■□□□□ 0.04
LDB2O43679 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.33■□□□□ 0.04
LDB2O43679 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.33■□□□□ 0.04
LDB2O43679 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.33■□□□□ 0.04
LDB2O43679 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.33■□□□□ 0.04
LDB2O43679 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.33■□□□□ 0.04
LDB2O43679 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.33■□□□□ 0.04
LDB2O43679 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.33■□□□□ 0.04
LDB2O43679 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
LDB2O43679 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.33■□□□□ 0.04
LDB2O43679 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.33■□□□□ 0.04
LDB2O43679 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.33■□□□□ 0.04
LDB2O43679 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.33■□□□□ 0.04
LDB2O43679 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 LILRP1-201ENST00000444199 1370 ntBASIC15.33■□□□□ 0.04
LDB2O43679 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 KRT8P22-201ENST00000562317 1415 ntBASIC15.33■□□□□ 0.04
LDB2O43679 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LDB2O43679 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LDB2O43679 REXO1L5P-201ENST00000622260 2098 ntBASIC15.32■□□□□ 0.04
LDB2O43679 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.32■□□□□ 0.04
LDB2O43679 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.32■□□□□ 0.04
LDB2O43679 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.32■□□□□ 0.04
LDB2O43679 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.32■□□□□ 0.04
LDB2O43679 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 CTBP2P3-201ENST00000585629 1255 ntBASIC15.32■□□□□ 0.04
LDB2O43679 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
LDB2O43679 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.32■□□□□ 0.04
LDB2O43679 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.32■□□□□ 0.04
LDB2O43679 AC239800.4-201ENST00000603712 296 ntBASIC15.32■□□□□ 0.04
LDB2O43679 AC008494.3-201ENST00000606615 944 ntBASIC15.32■□□□□ 0.04
LDB2O43679 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.32■□□□□ 0.04
LDB2O43679 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 PRSS30P-206ENST00000641773 873 ntBASIC15.32■□□□□ 0.04
LDB2O43679 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LDB2O43679 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LDB2O43679 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.32■□□□□ 0.04
LDB2O43679 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.32■□□□□ 0.04
LDB2O43679 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms