Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP2AO43633 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP2AO43633 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP2AO43633 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
CHMP2AO43633 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP2AO43633 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP2AO43633 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CHMP2AO43633 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP2AO43633 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP2AO43633 AC138035.3-201ENST00000622706 2791 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP2AO43633 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHMP2AO43633 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 KLF2P2-201ENST00000416807 1039 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 ARSEP1-201ENST00000420443 635 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP2AO43633 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.25■□□□□ 0.35
CHMP2AO43633 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 KRT18P25-201ENST00000508931 1278 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP2AO43633 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP2AO43633 AL022328.1-201ENST00000610050 478 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 AP005019.2-201ENST00000615104 511 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 AC013268.4-201ENST00000637413 2228 ntBASIC17.25■□□□□ 0.35
CHMP2AO43633 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP2AO43633 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP2AO43633 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP2AO43633 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHMP2AO43633 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CHMP2AO43633 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP2AO43633 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP2AO43633 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CHMP2AO43633 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP2AO43633 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHMP2AO43633 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 KRT43P-201ENST00000434019 910 ntBASIC17.24■□□□□ 0.35
CHMP2AO43633 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP2AO43633 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP2AO43633 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP2AO43633 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP2AO43633 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP2AO43633 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHMP2AO43633 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP2AO43633 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP2AO43633 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms