Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.99□□□□□ -0.01
HDAC3O15379 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HDAC3O15379 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.99□□□□□ -0.01
HDAC3O15379 AC018529.1-201ENST00000613063 361 ntBASIC14.99□□□□□ -0.01
HDAC3O15379 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.99□□□□□ -0.01
HDAC3O15379 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.99□□□□□ -0.01
HDAC3O15379 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HDAC3O15379 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HDAC3O15379 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.99□□□□□ -0.01
HDAC3O15379 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HDAC3O15379 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC3O15379 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
HDAC3O15379 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HDAC3O15379 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 AC067750.1-201ENST00000608826 6545 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HDAC3O15379 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HDAC3O15379 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 AC074338.1-201ENST00000416825 156 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 AC023274.1-201ENST00000418278 595 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 ALG1L8P-201ENST00000533887 760 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.98□□□□□ -0.01
HDAC3O15379 KRT126P-201ENST00000549467 1181 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC3O15379 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.98□□□□□ -0.01
HDAC3O15379 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 AC015802.1-201ENST00000588104 1449 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 AL122018.1-201ENST00000446607 2310 ntBASIC14.98□□□□□ -0.01
HDAC3O15379 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
HDAC3O15379 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC3O15379 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
HDAC3O15379 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC3O15379 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HDAC3O15379 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HDAC3O15379 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HDAC3O15379 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC3O15379 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms