Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 INGX-202ENST00000489074 768 ntBASIC16.44■□□□□ 0.22
FOXN3O00409 AC004066.1-201ENST00000502488 802 ntBASIC16.44■□□□□ 0.22
FOXN3O00409 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.44■□□□□ 0.22
FOXN3O00409 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.44■□□□□ 0.22
FOXN3O00409 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXN3O00409 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
FOXN3O00409 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXN3O00409 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
FOXN3O00409 AL360270.3-201ENST00000609118 1348 ntBASIC16.44■□□□□ 0.22
FOXN3O00409 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXN3O00409 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 VDAC1P7-201ENST00000462417 847 ntBASIC16.43■□□□□ 0.22
FOXN3O00409 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXN3O00409 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.43■□□□□ 0.22
FOXN3O00409 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.43■□□□□ 0.22
FOXN3O00409 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.43■□□□□ 0.22
FOXN3O00409 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
FOXN3O00409 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 AL049840.4-201ENST00000602422 811 ntBASIC16.43■□□□□ 0.22
FOXN3O00409 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
FOXN3O00409 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.43■□□□□ 0.22
FOXN3O00409 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FOXN3O00409 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.42■□□□□ 0.22
FOXN3O00409 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXN3O00409 LILRP1-201ENST00000444199 1370 ntBASIC16.42■□□□□ 0.22
FOXN3O00409 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.42■□□□□ 0.22
FOXN3O00409 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FOXN3O00409 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.42■□□□□ 0.22
FOXN3O00409 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms