Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 AC092127.1-201ENST00000567093 3455 ntBASIC18.11■□□□□ 0.49
NFKBIEO00221 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.11■□□□□ 0.49
NFKBIEO00221 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKBIEO00221 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKBIEO00221 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKBIEO00221 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKBIEO00221 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.11■□□□□ 0.49
NFKBIEO00221 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NFKBIEO00221 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.11■□□□□ 0.49
NFKBIEO00221 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKBIEO00221 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKBIEO00221 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.1■□□□□ 0.49
NFKBIEO00221 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 AC112504.1-201ENST00000623415 1841 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKBIEO00221 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NFKBIEO00221 XBP1P1-201ENST00000436573 652 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 AL354861.1-201ENST00000445213 355 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKBIEO00221 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKBIEO00221 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.1■□□□□ 0.49
NFKBIEO00221 ALG3P1-201ENST00000508806 1114 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 AC084752.1-201ENST00000509766 622 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.1■□□□□ 0.49
NFKBIEO00221 CR383656.3-201ENST00000551315 183 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.1■□□□□ 0.49
NFKBIEO00221 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.1■□□□□ 0.49
NFKBIEO00221 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 AC027601.3-201ENST00000622907 509 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 AC138466.5-201ENST00000624002 808 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
NFKBIEO00221 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
NFKBIEO00221 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NFKBIEO00221 AL359258.3-201ENST00000622910 2331 ntBASIC18.1■□□□□ 0.49
NFKBIEO00221 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.1■□□□□ 0.49
NFKBIEO00221 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NFKBIEO00221 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NFKBIEO00221 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.09■□□□□ 0.49
NFKBIEO00221 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.09■□□□□ 0.49
NFKBIEO00221 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NFKBIEO00221 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.09■□□□□ 0.49
NFKBIEO00221 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NFKBIEO00221 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.09■□□□□ 0.49
NFKBIEO00221 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.09■□□□□ 0.49
NFKBIEO00221 RNA5SP359-201ENST00000364838 113 ntBASIC18.09■□□□□ 0.49
NFKBIEO00221 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.09■□□□□ 0.49
NFKBIEO00221 BCAS2P2-201ENST00000425064 674 ntBASIC18.09■□□□□ 0.49
NFKBIEO00221 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms