Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 LINC01225-203ENST00000563550 1244 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AC015910.1-201ENST00000579400 975 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 Z83851.2-201ENST00000609564 659 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AL589935.2-201ENST00000616471 1231 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 LILRP1-201ENST00000444199 1370 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AP3S2-216ENST00000617003 1561 ntBASIC13.39□□□□□ -0.27
SHISA3A0PJX4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHISA3A0PJX4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 BANF1P1-201ENST00000553684 263 ntBASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC243562.1-201ENST00000560672 389 ntBASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHISA3A0PJX4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms