Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MYCLP2-201ENST00000449268 967 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC104596.2-201ENST00000512793 793 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC023310.3-201ENST00000557027 670 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC100756.1-201ENST00000562736 682 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC138749.3-201ENST00000567691 622 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC116165.1-201ENST00000611806 668 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KRT8P37-201ENST00000451609 1420 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AGAP7P-201ENST00000582299 2062 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AGAP14-201ENST00000624701 2060 ntBASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TCRBV4S1A1TA0A5B7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MEIS3P1-201ENST00000495167 958 ntBASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC123567.1-201ENST00000548294 1261 ntBASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC025048.3-201ENST00000590609 569 ntBASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC005702.4-201ENST00000618393 416 ntBASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 AC007292.2-201ENST00000593524 1812 ntBASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TCRBV4S1A1TA0A5B7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms