Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC009336.1-201ENST00000608941 1553 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AP3S2-216ENST00000617003 1561 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 UNC93B3-201ENST00000308076 687 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SRR-208ENST00000576848 588 ntTSL 4 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC011298.2-201ENST00000617989 482 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC020910.6-201ENST00000623084 1459 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC012313.8-201ENST00000595059 5402 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 NCLP1-201ENST00000445357 1963 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 AC072061.1-201ENST00000569710 2234 ntBASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LINC01558Q9Y6Z2 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC7.85□□□□□ -1.15
LINC01558Q9Y6Z2 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms