Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 RPL13AP20-201ENST00000459725 609 ntBASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 GNRHR2-203ENST00000581100 1187 ntBASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 AL139099.5-201ENST00000635274 300 ntBASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.41□□□□□ -0.1
PCDHGA9Q9Y5G4 CICP13-201ENST00000422015 2789 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC006033.1-201ENST00000440505 426 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KRT8P13-201ENST00000463294 1010 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC097359.3-201ENST00000603982 1210 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC091271.1-201ENST00000611877 1162 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC009542.2-202ENST00000619004 1067 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 AC069224.1-201ENST00000566372 1715 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 FAM45BP-202ENST00000592932 1624 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 DRD5P1-201ENST00000456605 1438 ntBASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDHGA9Q9Y5G4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
PCDHGA9Q9Y5G4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.4□□□□□ -0.11
PCDHGA9Q9Y5G4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms