Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 BX539320.1-201ENST00000623759 877 ntBASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 AC006058.4-201ENST00000624016 1670 ntBASIC13.82□□□□□ -0.2
HDGFL3Q9Y3E1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 AC098614.1-201ENST00000368528 745 ntBASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 CTBP2P3-201ENST00000585629 1255 ntBASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 AL358472.5-202ENST00000641448 1267 ntBASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 REXO1L4P-201ENST00000605109 1937 ntBASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.81□□□□□ -0.2
HDGFL3Q9Y3E1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HDGFL3Q9Y3E1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms