Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 RN7SL837P-201ENST00000463010 287 ntBASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 AC027307.3-201ENST00000594262 1100 ntBASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 MSTO2P-201ENST00000314835 1709 ntBASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DTX4Q9Y2E6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 REXO1L5P-201ENST00000622260 2098 ntBASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 RNU1-114P-201ENST00000365297 166 ntBASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 AL162726.2-201ENST00000438986 1017 ntBASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 INE1-201ENST00000456273 945 ntBASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 RN7SL752P-201ENST00000463779 287 ntBASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DTX4Q9Y2E6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms