Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
AP4E1Q9UPM8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.96■□□□□ 0.14
AP4E1Q9UPM8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC087499.6-201ENST00000411576 835 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC098850.1-201ENST00000419919 790 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 CHCHD2P3-201ENST00000603038 451 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC007431.3-201ENST00000623221 587 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 AL138799.1-201ENST00000448213 1675 ntBASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4E1Q9UPM8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 AC134915.1-201ENST00000426461 574 ntBASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 AL442647.2-201ENST00000429864 857 ntBASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 AL353779.1-201ENST00000434793 351 ntBASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 HMGN1P19-201ENST00000436976 333 ntBASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 API5-211ENST00000534695 560 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 AC120045.2-201ENST00000567334 178 ntBASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4E1Q9UPM8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms