Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 HNRNPA1P23-201ENST00000491091 1133 ntBASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 RN7SL121P-201ENST00000584223 273 ntBASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 AC005252.2-201ENST00000624630 1141 ntBASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 AP001002.2-201ENST00000625137 386 ntBASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 KRT8P14-201ENST00000414254 1442 ntBASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGC3Q9UN70 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 ACKR1-201ENST00000368121 1240 ntBASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 DGCR5-201ENST00000399539 862 ntBASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AL162726.2-201ENST00000438986 1017 ntBASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AC114812.1-204ENST00000449669 728 ntBASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AP001582.1-201ENST00000525856 295 ntBASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 CICP24-201ENST00000605464 2705 ntBASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGC3Q9UN70 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 RNU1-114P-201ENST00000365297 166 ntBASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 CLUHP6-201ENST00000580789 941 ntBASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AC138761.1-201ENST00000584393 385 ntBASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AP005019.2-201ENST00000615104 511 ntBASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 AC006213.4-201ENST00000616184 634 ntBASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC3Q9UN70 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms