Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 CPO-201ENST00000272852 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC233289.1-201ENST00000403700 508 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC004461.1-201ENST00000412461 403 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 RPL12P2-201ENST00000424565 493 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC140658.5-201ENST00000438532 169 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 NPM1P9-201ENST00000453156 844 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC023141.5-201ENST00000458585 616 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 RN7SL589P-201ENST00000481268 310 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AGGF1P3-201ENST00000493675 1213 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC093720.1-201ENST00000505681 714 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC068339.2-201ENST00000534395 618 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC116165.2-201ENST00000616705 206 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC087269.2-201ENST00000641764 975 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AL358913.2-201ENST00000553881 1548 ntBASIC18.57■□□□□ 0.56
RNF216Q9NWF9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF216Q9NWF9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AL353692.2-201ENST00000407054 335 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 LINC00370-201ENST00000455487 698 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 MTND3P24-201ENST00000506306 329 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC113398.2-201ENST00000507630 558 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 BOLA3P1-201ENST00000530713 355 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AL356055.1-201ENST00000602528 446 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AL035422.2-201ENST00000603059 565 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC007038.2-201ENST00000608095 740 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC245297.2-201ENST00000610119 565 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 AC026120.1-201ENST00000611536 926 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC18.56■□□□□ 0.56
RNF216Q9NWF9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF216Q9NWF9 RNF216P1-203ENST00000404404 2427 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms