Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC013467.2-201ENST00000605472 835 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AC129492.7-201ENST00000622992 756 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AC074183.2-201ENST00000623112 922 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 AL021920.2-201ENST00000624828 1351 ntBASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDC42SE1Q9NRR8 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 KRT87P-202ENST00000534226 1464 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PC-214ENST00000628663 1470 ntTSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AL355355.2-201ENST00000442321 338 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AC009065.1-201ENST00000564055 1225 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 SLC7A5P1-201ENST00000568957 537 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AL355001.2-201ENST00000620617 1191 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AC092028.1-202ENST00000641483 3547 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AC092028.1-201ENST00000641781 3540 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ITIH1-201ENST00000273283 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ILF3-AS1-201ENST00000591501 1983 ntBASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PIGM-201ENST00000368090 4319 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDC42SE1Q9NRR8 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms