Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC123567.1-201ENST00000548294 1261 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 AC107373.2-201ENST00000607735 490 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBQLN4Q9NRR5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 ZBED1P1-201ENST00000502364 1930 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AL138799.1-201ENST00000448213 1675 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AC092552.1-201ENST00000547243 906 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 TMEM261P1-201ENST00000604899 340 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 MIR8072-201ENST00000614241 80 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 INTS4P2-202ENST00000614726 2019 ntBASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
UBQLN4Q9NRR5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
UBQLN4Q9NRR5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.15
UBQLN4Q9NRR5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
UBQLN4Q9NRR5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 REXO1L4P-201ENST00000605109 1937 ntBASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 MYCLP2-201ENST00000449268 967 ntBASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 API5-211ENST00000534695 560 ntTSL 5 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
UBQLN4Q9NRR5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms