Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE2Q9NRR3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 BX640514.1-201ENST00000583223 1918 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ST20-AS1-201ENST00000560255 4223 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 KRT18P32-201ENST00000424695 1287 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC004832.2-201ENST00000426397 482 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC007967.4-201ENST00000614700 386 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 NME4-212ENST00000621774 904 ntTSL 3 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC105339.1-204ENST00000636249 355 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC018529.2-202ENST00000611482 3087 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 AC113367.3-201ENST00000508316 1912 ntBASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE2Q9NRR3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE2Q9NRR3 AC018442.1-201ENST00000421439 2061 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms