Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AC148477.4-201ENST00000613430 1793 ntBASIC17■□□□□ 0.31
PDLIM7Q9NR12 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AL008707.1-201ENST00000422498 534 ntBASIC17■□□□□ 0.31
PDLIM7Q9NR12 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AC022217.1-201ENST00000521069 738 ntBASIC17■□□□□ 0.31
PDLIM7Q9NR12 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AL645939.5-201ENST00000606834 243 ntBASIC17■□□□□ 0.31
PDLIM7Q9NR12 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AP003419.4-201ENST00000616071 517 ntBASIC17■□□□□ 0.31
PDLIM7Q9NR12 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 AC008132.1-202ENST00000342005 1389 ntBASIC17■□□□□ 0.31
PDLIM7Q9NR12 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM7Q9NR12 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM7Q9NR12 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 AC069218.1-201ENST00000435269 762 ntBASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 NUP210P1-202ENST00000504322 710 ntBASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 AC024681.1-201ENST00000521917 487 ntBASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 PPY2P-201ENST00000582808 702 ntBASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 AC132872.4-202ENST00000622924 2756 ntBASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM7Q9NR12 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 AC006480.2-201ENST00000609770 1337 ntBASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 AC126365.1-201ENST00000578585 1514 ntBASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 AL139094.1-201ENST00000405549 1188 ntBASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM7Q9NR12 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms