Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 AC008494.3-201ENST00000606615 944 ntBASIC13.19□□□□□ -0.3
GCM1Q9NP62 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 AC090616.6-203ENST00000579186 1945 ntBASIC13.19□□□□□ -0.3
GCM1Q9NP62 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.19□□□□□ -0.3
GCM1Q9NP62 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GCM1Q9NP62 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 MIR8072-201ENST00000614241 80 ntBASIC13.18□□□□□ -0.3
GCM1Q9NP62 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 AC020658.6-201ENST00000623564 1870 ntBASIC13.18□□□□□ -0.3
GCM1Q9NP62 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.18□□□□□ -0.3
GCM1Q9NP62 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GCM1Q9NP62 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AC098850.1-201ENST00000419919 790 ntBASIC13.17□□□□□ -0.3
GCM1Q9NP62 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.17□□□□□ -0.3
GCM1Q9NP62 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GCM1Q9NP62 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms