Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM86GP-201ENST00000448322 971 ntBASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 KRT18P43-201ENST00000469825 1281 ntBASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 DUX4L27-201ENST00000554796 1261 ntBASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 AL390755.1-201ENST00000623716 2027 ntBASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
UPF3BQ9BZI7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 FAM45BP-202ENST00000592932 1624 ntBASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 AC005498.2-205ENST00000593218 784 ntBASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 AL590560.3-201ENST00000623350 461 ntBASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 AC004461.2-201ENST00000629517 803 ntBASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 AC026748.1-201ENST00000624349 3251 ntBASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPF3BQ9BZI7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AC232323.1-201ENST00000540724 2099 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 REXO1L5P-201ENST00000622260 2098 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 MIR943-201ENST00000401286 94 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 TSSK5P-201ENST00000423978 907 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AL158211.3-201ENST00000607385 239 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AC012645.4-201ENST00000610691 1061 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 AL161772.1-201ENST00000610494 4412 ntBASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms