Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 RPL17P11-201ENST00000417593 544 ntBASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 KLF2P1-201ENST00000447438 1042 ntBASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 AC006453.1-201ENST00000636037 1257 ntBASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 AC006058.4-201ENST00000624016 1670 ntBASIC19.62■□□□□ 0.73
PCDH11XQ9BZA7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AC019193.1-201ENST00000506678 823 ntBASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AC008805.1-201ENST00000590892 364 ntBASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 AL139384.1-201ENST00000612143 3047 ntBASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH11XQ9BZA7 MBLAC2-202ENST00000514906 1936 ntBASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 FAM90A7P-201ENST00000382628 1395 ntBASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 FAM90A23P-201ENST00000400136 1395 ntBASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDH11XQ9BZA7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms