Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 AC068276.1-201ENST00000605793 379 ntBASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 AC099522.2-201ENST00000607001 744 ntBASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 AC087742.2-201ENST00000616113 740 ntBASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 AC110285.6-201ENST00000617652 491 ntBASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 OR2A3P-202ENST00000641249 1776 ntBASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP3-3Q9BYR6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 FSHB-201ENST00000254122 1698 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC9.9□□□□□ -0.83
KRTAP3-3Q9BYR6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 DPPA2-201ENST00000478945 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL590787.1-201ENST00000568856 1315 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 IRS3P-201ENST00000223076 1006 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 RNU6-40P-201ENST00000384254 107 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 RN7SKP270-201ENST00000411297 312 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC009302.1-201ENST00000417147 390 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 SGO1-204ENST00000417364 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 RPL3P4-201ENST00000417615 423 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 PPP1R2P1-209ENST00000420261 678 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 Z99497.1-201ENST00000421282 135 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC091799.1-201ENST00000422823 811 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC236972.2-201ENST00000434979 310 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC097358.1-201ENST00000438827 582 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 HMGB3P6-201ENST00000444896 598 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 U8.20-201ENST00000459445 131 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TM4SF18-203ENST00000470080 907 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 MTCO2P4-201ENST00000517968 247 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC078814.3-201ENST00000553036 491 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC007342.2-201ENST00000568878 395 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC008507.1-201ENST00000587506 734 ntBASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01905-203ENST00000589450 620 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC9.89□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms