Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 AC022144.1-201ENST00000602255 1580 ntBASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 INTS4P1-203ENST00000641008 3683 ntBASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RSPO3Q9BXY4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AC104794.3-201ENST00000566840 1248 ntBASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AC107373.2-201ENST00000607735 490 ntBASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AC093512.1-201ENST00000617969 520 ntBASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 KRT8P14-201ENST00000414254 1442 ntBASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RSPO3Q9BXY4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RSPO3Q9BXY4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms