Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 CYP4F23P-201ENST00000593402 1579 ntBASIC4.49□□□□□ -1.69
HMCN1Q96RW7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 ERP29P1-201ENST00000442902 706 ntBASIC4.49□□□□□ -1.69
HMCN1Q96RW7 AC018638.5-201ENST00000450885 754 ntBASIC4.49□□□□□ -1.69
HMCN1Q96RW7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 AC015818.3-201ENST00000583797 589 ntBASIC4.49□□□□□ -1.69
HMCN1Q96RW7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC4.49□□□□□ -1.69
HMCN1Q96RW7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC020978.8-201ENST00000571975 3022 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TSEN15P3-201ENST00000422363 367 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NRADDP-201ENST00000437305 691 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RN7SL794P-201ENST00000469816 280 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 HINT1-205ENST00000508488 703 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MIR2277-201ENST00000515916 93 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RNA5SP406-201ENST00000516106 112 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC008825.2-201ENST00000603374 718 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC124944.3-201ENST00000607976 1304 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AP003306.2-201ENST00000400902 485 ntTSL 4 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 HLA-DRB9-201ENST00000449413 343 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 GGNBP1-204ENST00000613113 887 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MIR6871-201ENST00000613433 56 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC4.48□□□□□ -1.69
HMCN1Q96RW7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC4.48□□□□□ -1.69
HMCN1Q96RW7 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms