Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.64□□□□□ -0.07
BBS4Q96RK4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 TNRC18P2-201ENST00000417666 2714 ntBASIC14.64□□□□□ -0.07
BBS4Q96RK4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BBS4Q96RK4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AGAP7P-201ENST00000582299 2062 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 AGAP14-201ENST00000624701 2060 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 BASP1P1-201ENST00000430708 665 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AC009477.1-201ENST00000452936 217 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AC093214.1-201ENST00000511688 1107 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AC025181.2-201ENST00000606994 802 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 AC022144.1-201ENST00000602255 1580 ntBASIC14.63□□□□□ -0.07
BBS4Q96RK4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.63□□□□□ -0.07
BBS4Q96RK4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BBS4Q96RK4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 WASH3P-207ENST00000560956 1394 ntBASIC14.62□□□□□ -0.07
BBS4Q96RK4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 FAM8A3P-201ENST00000427218 844 ntBASIC14.62□□□□□ -0.07
BBS4Q96RK4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AC092183.1-201ENST00000469884 875 ntBASIC14.62□□□□□ -0.07
BBS4Q96RK4 MEIS3P1-201ENST00000495167 958 ntBASIC14.62□□□□□ -0.07
BBS4Q96RK4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AC009407.1-201ENST00000568958 598 ntBASIC14.62□□□□□ -0.07
BBS4Q96RK4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms