Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 AC024909.3-201ENST00000611513 2257 ntBASIC15.41■□□□□ 0.06
SIPA1Q96FS4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.41■□□□□ 0.06
SIPA1Q96FS4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SIPA1Q96FS4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 AC007969.1-201ENST00000433675 447 ntBASIC15.4■□□□□ 0.06
SIPA1Q96FS4 MTX1P1-201ENST00000440904 838 ntBASIC15.4■□□□□ 0.06
SIPA1Q96FS4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ENPP7P14-201ENST00000621765 1040 ntBASIC15.4■□□□□ 0.06
SIPA1Q96FS4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.4■□□□□ 0.06
SIPA1Q96FS4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AC015818.8-201ENST00000587907 1519 ntBASIC15.39■□□□□ 0.05
SIPA1Q96FS4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AL591846.1-201ENST00000451736 433 ntBASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ZNF767P-206ENST00000513792 565 ntBASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 KRT8P14-201ENST00000414254 1442 ntBASIC15.39■□□□□ 0.05
SIPA1Q96FS4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.39■□□□□ 0.05
SIPA1Q96FS4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms