Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM11Q96F44 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.28■□□□□ 0.2
TRIM11Q96F44 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM11Q96F44 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
TRIM11Q96F44 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 AC007787.1-201ENST00000588095 1583 ntBASIC16.27■□□□□ 0.2
TRIM11Q96F44 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM11Q96F44 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM11Q96F44 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM11Q96F44 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM11Q96F44 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM11Q96F44 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM11Q96F44 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM11Q96F44 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM11Q96F44 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM11Q96F44 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM11Q96F44 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM11Q96F44 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms