Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 MIR1202-201ENST00000408529 83 ntBASIC16.63■□□□□ 0.25
PGBD4Q96DM1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PGBD4Q96DM1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 KRT8P14-201ENST00000414254 1442 ntBASIC16.62■□□□□ 0.25
PGBD4Q96DM1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AC091271.1-201ENST00000611877 1162 ntBASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PGBD4Q96DM1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PGBD4Q96DM1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PGBD4Q96DM1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PGBD4Q96DM1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PGBD4Q96DM1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms