Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HPS1Q92902 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.24□□□□□ -0.13
HPS1Q92902 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.24□□□□□ -0.13
HPS1Q92902 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HPS1Q92902 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
HPS1Q92902 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 AC140479.7-201ENST00000636301 2332 ntBASIC14.23□□□□□ -0.13
HPS1Q92902 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.23□□□□□ -0.13
HPS1Q92902 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 SSR1P1-201ENST00000407630 814 ntBASIC14.23□□□□□ -0.13
HPS1Q92902 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.23□□□□□ -0.13
HPS1Q92902 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.23□□□□□ -0.13
HPS1Q92902 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.23□□□□□ -0.13
HPS1Q92902 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.23□□□□□ -0.13
HPS1Q92902 AC092723.2-201ENST00000624955 793 ntBASIC14.23□□□□□ -0.13
HPS1Q92902 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.23□□□□□ -0.13
HPS1Q92902 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.23□□□□□ -0.13
HPS1Q92902 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 GGT3P-204ENST00000453783 1664 ntBASIC14.23□□□□□ -0.13
HPS1Q92902 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HPS1Q92902 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HPS1Q92902 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.22□□□□□ -0.13
HPS1Q92902 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 AC012569.1-201ENST00000591191 1524 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HPS1Q92902 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
HPS1Q92902 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 AC131009.4-201ENST00000624048 1740 ntBASIC14.22□□□□□ -0.13
HPS1Q92902 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HPS1Q92902 AC002056.1-201ENST00000395613 760 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms