Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 EIF3FP3-201ENST00000434851 1086 ntBASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 RPL13AP25-201ENST00000484130 612 ntBASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 AC022137.2-201ENST00000503482 481 ntBASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 AC009486.1-201ENST00000569860 813 ntBASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 AGAP7P-201ENST00000582299 2062 ntBASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 AGAP14-201ENST00000624701 2060 ntBASIC18.07■□□□□ 0.48
NKX2-3Q8TAU0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 TNRC18P2-201ENST00000417666 2714 ntBASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 KLF2P2-201ENST00000416807 1039 ntBASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC012441.1-201ENST00000446669 685 ntBASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NKX2-3Q8TAU0 AP002414.2-201ENST00000591780 3365 ntBASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 AC023157.3-201ENST00000619086 2088 ntBASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 AL360270.3-201ENST00000609118 1348 ntBASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NKX2-3Q8TAU0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms