Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 AC239800.4-201ENST00000603712 296 ntBASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAM1L1Q8N609 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AC018665.1-201ENST00000622927 1362 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 LRRC59-203ENST00000576448 1531 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 REXO1L5P-201ENST00000622260 2098 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 KRT43P-201ENST00000434019 910 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AC022616.1-201ENST00000518688 554 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AL162274.1-201ENST00000617191 1098 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AL603764.1-201ENST00000636452 321 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 AC046158.3-201ENST00000624947 2558 ntBASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAM1L1Q8N609 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms