Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 AC119751.2-201ENST00000504529 210 ntBASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 AC067930.6-201ENST00000623257 4947 ntBASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 KRT223P-202ENST00000449164 1292 ntBASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AC036164.1-201ENST00000570544 333 ntBASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AC133552.6-201ENST00000613406 534 ntBASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 COX11-210ENST00000639671 696 ntBASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 TNRC18P2-201ENST00000417666 2714 ntBASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC33Q8N5R6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC33Q8N5R6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms