Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 ATP5G2P4-201ENST00000442175 420 ntBASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 AC022616.1-201ENST00000518688 554 ntBASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 RN7SL48P-201ENST00000579283 293 ntBASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 WASH3P-207ENST00000560956 1394 ntBASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.43□□□□□ -0.1
ARHGEF39Q8N4T4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AC104640.1-201ENST00000562617 2109 ntBASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AC234783.1-201ENST00000441761 496 ntBASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 AC017083.2-201ENST00000608069 979 ntBASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ARHGEF39Q8N4T4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms