Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.44□□□□□ -0.1
DEPDC4Q8N2C3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 AC117489.1-201ENST00000625169 3217 ntBASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 UXT-AS1-201ENST00000590504 1525 ntBASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 KRT18P32-201ENST00000424695 1287 ntBASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.43□□□□□ -0.1
DEPDC4Q8N2C3 AC018892.3-201ENST00000623986 2499 ntBASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DEPDC4Q8N2C3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms