Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CNGA4Q8IV77 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AC138969.3-201ENST00000546612 1459 ntBASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AC138932.2-201ENST00000548268 1459 ntBASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AC126755.4-201ENST00000549796 1459 ntBASIC16.74■□□□□ 0.27
CNGA4Q8IV77 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AC074338.1-201ENST00000416825 156 ntBASIC16.74■□□□□ 0.27
CNGA4Q8IV77 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 BX640515.1-201ENST00000617215 977 ntBASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 AP001267.2-201ENST00000532619 2086 ntBASIC16.74■□□□□ 0.27
CNGA4Q8IV77 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.74■□□□□ 0.27
CNGA4Q8IV77 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 MKNK2P1-201ENST00000437526 628 ntBASIC16.73■□□□□ 0.27
CNGA4Q8IV77 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 AL133215.2-201ENST00000609242 977 ntBASIC16.73■□□□□ 0.27
CNGA4Q8IV77 C20orf181-201ENST00000623918 480 ntBASIC16.73■□□□□ 0.27
CNGA4Q8IV77 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNGA4Q8IV77 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms