Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.92■□□□□ 0.62
COL23A1Q86Y22 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 AP003398.1-201ENST00000531124 318 ntBASIC18.91■□□□□ 0.62
COL23A1Q86Y22 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 MIR5196-201ENST00000578146 115 ntBASIC18.91■□□□□ 0.62
COL23A1Q86Y22 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 AC092299.1-201ENST00000632679 757 ntBASIC18.91■□□□□ 0.62
COL23A1Q86Y22 LINC00431-202ENST00000636375 159 ntBASIC18.91■□□□□ 0.62
COL23A1Q86Y22 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.91■□□□□ 0.62
COL23A1Q86Y22 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL23A1Q86Y22 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 LINC01165-201ENST00000445190 1623 ntBASIC18.9■□□□□ 0.62
COL23A1Q86Y22 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 AGGF1P2-201ENST00000426656 2106 ntBASIC18.9■□□□□ 0.62
COL23A1Q86Y22 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 AP001527.2-201ENST00000614441 631 ntBASIC18.9■□□□□ 0.62
COL23A1Q86Y22 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL23A1Q86Y22 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.89■□□□□ 0.62
COL23A1Q86Y22 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
COL23A1Q86Y22 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL23A1Q86Y22 AC099398.1-201ENST00000567919 2776 ntBASIC18.89■□□□□ 0.62
COL23A1Q86Y22 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 IL9RP3-201ENST00000442856 1674 ntBASIC18.89■□□□□ 0.61
COL23A1Q86Y22 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 HIST2H2BA-201ENST00000412169 381 ntBASIC18.89■□□□□ 0.61
COL23A1Q86Y22 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 AC006158.1-201ENST00000610661 249 ntBASIC18.89■□□□□ 0.61
COL23A1Q86Y22 AC087392.5-201ENST00000612517 489 ntBASIC18.89■□□□□ 0.61
COL23A1Q86Y22 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 TNRC18P3-201ENST00000441896 2691 ntBASIC18.89■□□□□ 0.61
COL23A1Q86Y22 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL23A1Q86Y22 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms