Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 TLE1P1-201ENST00000422965 589 ntBASIC15.45■□□□□ 0.06
DENND4AQ7Z401 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 RN7SL258P-201ENST00000478664 300 ntBASIC15.45■□□□□ 0.06
DENND4AQ7Z401 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 AC003102.2-201ENST00000589195 1469 ntBASIC15.45■□□□□ 0.06
DENND4AQ7Z401 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
DENND4AQ7Z401 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AP000358.1-201ENST00000456260 156 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 RPL18AP3-201ENST00000462885 528 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AP005117.1-202ENST00000581724 1908 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AP002803.1-201ENST00000528836 498 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 PGAM1P5-201ENST00000548011 764 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 FRMPD2B-201ENST00000431305 1347 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 LINC01165-201ENST00000445190 1623 ntBASIC15.44■□□□□ 0.06
DENND4AQ7Z401 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.44■□□□□ 0.06
DENND4AQ7Z401 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 DNM1P30-201ENST00000563586 452 ntBASIC15.43■□□□□ 0.06
DENND4AQ7Z401 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DENND4AQ7Z401 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 1037.8 ms