Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC62Q6P9F0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 AC009090.5-201ENST00000624886 2285 ntBASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 RPSAP36-202ENST00000494591 1261 ntBASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 AC243960.2-201ENST00000600996 747 ntBASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC62Q6P9F0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 LRRC59-203ENST00000576448 1531 ntBASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 BTBD6P1-201ENST00000412176 1267 ntBASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 CNN2P10-201ENST00000443067 918 ntBASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 EEF1DP1-201ENST00000585891 896 ntBASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC62Q6P9F0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 AC015818.8-201ENST00000587907 1519 ntBASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC62Q6P9F0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms