Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.37□□□□□ -0.11
REEP3Q6NUK4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 LINC01115-203ENST00000606068 577 ntBASIC14.37□□□□□ -0.11
REEP3Q6NUK4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
REEP3Q6NUK4 AC138969.3-201ENST00000546612 1459 ntBASIC14.37□□□□□ -0.11
REEP3Q6NUK4 AC138932.2-201ENST00000548268 1459 ntBASIC14.37□□□□□ -0.11
REEP3Q6NUK4 AC126755.4-201ENST00000549796 1459 ntBASIC14.37□□□□□ -0.11
REEP3Q6NUK4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 RN7SL618P-201ENST00000477850 296 ntBASIC14.36□□□□□ -0.11
REEP3Q6NUK4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TEX28P1-201ENST00000613479 1221 ntBASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TEX28P2-201ENST00000617764 1221 ntBASIC14.36□□□□□ -0.11
REEP3Q6NUK4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
REEP3Q6NUK4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
REEP3Q6NUK4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms