Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 FAM86LP-201ENST00000478302 853 ntBASIC18.38■□□□□ 0.53
RNF20Q5VTR2 INGX-202ENST00000489074 768 ntBASIC18.38■□□□□ 0.53
RNF20Q5VTR2 AC004066.1-201ENST00000502488 802 ntBASIC18.38■□□□□ 0.53
RNF20Q5VTR2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 AC013726.1-201ENST00000563747 2285 ntBASIC18.38■□□□□ 0.53
RNF20Q5VTR2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RNF20Q5VTR2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 SPDYE19P-201ENST00000338590 713 ntBASIC18.37■□□□□ 0.53
RNF20Q5VTR2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 RRP7BP-205ENST00000566851 833 ntBASIC18.37■□□□□ 0.53
RNF20Q5VTR2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF20Q5VTR2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 ACE3P-201ENST00000423435 1973 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF20Q5VTR2 RN7SL399P-201ENST00000471648 279 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 RPL13AP25-201ENST00000484130 612 ntBASIC18.36■□□□□ 0.53
RNF20Q5VTR2 GAPDHP40-201ENST00000505218 1006 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms