Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AC145285.3-201ENST00000564603 959 ntBASIC12.31□□□□□ -0.44
FAM78BQ5VT40 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AC023141.13-201ENST00000604991 943 ntBASIC12.31□□□□□ -0.44
FAM78BQ5VT40 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 IL9RP2-201ENST00000423948 1312 ntBASIC12.31□□□□□ -0.44
FAM78BQ5VT40 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
FAM78BQ5VT40 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 REXO1L2P-201ENST00000425429 2069 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC007967.2-201ENST00000432613 625 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 FDX1P1-201ENST00000449115 551 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC034105.1-201ENST00000563488 319 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC064836.3-201ENST00000607928 673 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 BCAR1-209ENST00000546196 1340 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 ZNF259P1-201ENST00000407656 1365 ntBASIC12.3□□□□□ -0.44
FAM78BQ5VT40 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
FAM78BQ5VT40 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
FAM78BQ5VT40 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM78BQ5VT40 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms