Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 RN7SL396P-201ENST00000471086 295 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 LINC00634-202ENST00000505157 222 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 CR383656.3-201ENST00000551315 183 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 AP003680.1-201ENST00000598970 3660 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 PIN4P1-201ENST00000451079 396 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 C2orf69P1-201ENST00000563532 1093 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 AL391005.1-201ENST00000623953 2435 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 LINC01815-202ENST00000641468 1409 ntBASIC10.01□□□□□ -0.81
VPS13DQ5THJ4 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 FTH1P22-201ENST00000456305 520 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AP005117.1-202ENST00000581724 1908 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TMBIM7P-202ENST00000641474 1516 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC012073.1-201ENST00000606114 1108 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 LINC01101-201ENST00000622953 1884 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 AL365203.3-201ENST00000609742 2057 ntBASIC10□□□□□ -0.81
VPS13DQ5THJ4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13DQ5THJ4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC10□□□□□ -0.81
VPS13DQ5THJ4 PHBP15-201ENST00000574228 665 ntBASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms