Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 AL645939.2-201ENST00000427340 991 ntBASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 EEF1DP4-201ENST00000446006 880 ntBASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 AC093028.1-201ENST00000622998 982 ntBASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
ATPAF1Q5TC12 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AL136982.4-201ENST00000437689 1740 ntBASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 CYP4F24P-201ENST00000586049 1580 ntBASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 KLF2P3-201ENST00000451977 1087 ntBASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC140878.1-201ENST00000565277 250 ntBASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC117489.1-201ENST00000625169 3217 ntBASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AC148477.4-201ENST00000613430 1793 ntBASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
ATPAF1Q5TC12 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AC140479.7-201ENST00000636301 2332 ntBASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.41□□□□□ -0.26
ATPAF1Q5TC12 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms