Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 AC005915.1-201ENST00000624912 2018 ntBASIC13.07□□□□□ -0.32
LRRK2Q5S007 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 AC078925.2-201ENST00000624013 1973 ntBASIC13.07□□□□□ -0.32
LRRK2Q5S007 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LRRK2Q5S007 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LRRK2Q5S007 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AC100827.2-201ENST00000563214 1194 ntBASIC13.06□□□□□ -0.32
LRRK2Q5S007 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 SIGLEC18P-201ENST00000602271 909 ntBASIC13.06□□□□□ -0.32
LRRK2Q5S007 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 DUX4L47-201ENST00000566374 394 ntBASIC13.06□□□□□ -0.32
LRRK2Q5S007 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRK2Q5S007 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRK2Q5S007 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 HLA-K-203ENST00000430151 1046 ntBASIC13.05□□□□□ -0.32
LRRK2Q5S007 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 MIR2392-201ENST00000584881 84 ntBASIC13.05□□□□□ -0.32
LRRK2Q5S007 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms