Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 MTX1P1-201ENST00000440904 838 ntBASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 POM121L9P-203ENST00000441984 1285 ntBASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AC103810.3-201ENST00000583567 96 ntBASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AL096828.3-201ENST00000615354 462 ntBASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 AL365203.3-201ENST00000609742 2057 ntBASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNFT1Q5M7Z0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 RPL5P21-201ENST00000404620 815 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 BCYRN1-201ENST00000418539 200 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC245100.3-201ENST00000441281 285 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC022616.1-201ENST00000518688 554 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AP003171.2-201ENST00000528208 925 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 MIR3908-201ENST00000579798 126 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC104982.3-201ENST00000581995 514 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC004466.1-201ENST00000599515 1080 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AL022328.3-201ENST00000607943 679 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AL008638.5-201ENST00000623814 1298 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC015818.8-201ENST00000587907 1519 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC090616.6-203ENST00000579186 1945 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AL157414.3-201ENST00000624276 1954 ntBASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNFT1Q5M7Z0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms