Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC144BQ3MJ40 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 AC007191.1-201ENST00000623179 2995 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 AC005229.1-201ENST00000392885 409 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 AC099336.1-201ENST00000417053 1171 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 SOCS2P1-201ENST00000417727 557 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 ACTBP11-201ENST00000436287 1126 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PHKG1P2-201ENST00000457537 863 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 PTP4A1P2-201ENST00000546033 454 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 C18orf15-201ENST00000623680 2534 ntBASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC144BQ3MJ40 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AC134407.2-201ENST00000625089 1978 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AC007292.2-201ENST00000593524 1812 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 MIR1908-201ENST00000410394 80 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 SLED1-202ENST00000512051 380 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AP001889.1-201ENST00000525414 633 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AC068587.3-201ENST00000526613 355 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 FAM8A2P-201ENST00000528813 1142 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AL049840.4-201ENST00000602422 811 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AC005089.1-201ENST00000619486 2241 ntBASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC144BQ3MJ40 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms