Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 MIR1233-2-201ENST00000408138 82 ntBASIC16.97■□□□□ 0.31
TSR1Q2NL82 MIR1233-1-201ENST00000408722 82 ntBASIC16.97■□□□□ 0.31
TSR1Q2NL82 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 AC243562.1-201ENST00000560672 389 ntBASIC16.97■□□□□ 0.31
TSR1Q2NL82 AC026120.1-201ENST00000611536 926 ntBASIC16.97■□□□□ 0.31
TSR1Q2NL82 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TSR1Q2NL82 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TSR1Q2NL82 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 UXT-AS1-201ENST00000590504 1525 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 AC007191.1-201ENST00000623179 2995 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 AC004832.2-201ENST00000426397 482 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 FAM58CP-201ENST00000435741 640 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 HMGB3P14-201ENST00000494195 599 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 MIR3687-2-201ENST00000577708 61 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 MIR3687-1-201ENST00000614492 61 ntBASIC16.96■□□□□ 0.31
TSR1Q2NL82 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TSR1Q2NL82 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TSR1Q2NL82 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.96■□□□□ 0.3
TSR1Q2NL82 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TSR1Q2NL82 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TSR1Q2NL82 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TSR1Q2NL82 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TSR1Q2NL82 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 AC084364.1-201ENST00000551967 1556 ntBASIC16.95■□□□□ 0.3
TSR1Q2NL82 AP3S2-216ENST00000617003 1561 ntBASIC16.95■□□□□ 0.3
TSR1Q2NL82 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.95■□□□□ 0.3
TSR1Q2NL82 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TSR1Q2NL82 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms