Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 GPR182-203ENST00000622922 591 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 AP001002.3-201ENST00000623482 206 ntBASIC18.23■□□□□ 0.51
PDS5AQ29RF7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDS5AQ29RF7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 KRT8P4-201ENST00000509735 1454 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AL133338.1-201ENST00000565695 1517 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC136621.1-201ENST00000624017 2304 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC132872.4-202ENST00000622924 2756 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC105917.1-201ENST00000506637 2539 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC103810.3-201ENST00000583567 96 ntBASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.22■□□□□ 0.51
PDS5AQ29RF7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AC011840.2-201ENST00000563063 1520 ntBASIC18.21■□□□□ 0.51
PDS5AQ29RF7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 ALG3P1-201ENST00000508806 1114 ntBASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AP001258.2-201ENST00000529891 490 ntBASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AL358472.3-201ENST00000608147 415 ntBASIC18.21■□□□□ 0.51
PDS5AQ29RF7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDS5AQ29RF7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.21■□□□□ 0.5
PDS5AQ29RF7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.2■□□□□ 0.5
PDS5AQ29RF7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms