Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 BAK1P1-201ENST00000317045 636 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 AC012441.2-201ENST00000444843 739 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.34□□□□□ -0.11
FOXC1Q12948 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.34□□□□□ -0.11
FOXC1Q12948 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 AL118516.1-201ENST00000564152 670 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 AL132657.2-201ENST00000564417 358 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 NUDT4P2-201ENST00000578341 546 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 MIR4313-201ENST00000580760 101 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 MIR4522-201ENST00000584932 87 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 AC027281.2-201ENST00000623856 713 ntBASIC14.34□□□□□ -0.11
FOXC1Q12948 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FOXC1Q12948 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.34□□□□□ -0.11
FOXC1Q12948 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FOXC1Q12948 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
FOXC1Q12948 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.33□□□□□ -0.11
FOXC1Q12948 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.33□□□□□ -0.11
FOXC1Q12948 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
FOXC1Q12948 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.33□□□□□ -0.11
FOXC1Q12948 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
FOXC1Q12948 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.33□□□□□ -0.11
FOXC1Q12948 AP000593.2-201ENST00000542775 1433 ntBASIC14.33□□□□□ -0.11
FOXC1Q12948 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
FOXC1Q12948 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FOXC1Q12948 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.33□□□□□ -0.12
FOXC1Q12948 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FOXC1Q12948 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FOXC1Q12948 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FOXC1Q12948 LYPLA2P1-203ENST00000447689 696 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXC1Q12948 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
FOXC1Q12948 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXC1Q12948 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.33□□□□□ -0.12
FOXC1Q12948 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.33□□□□□ -0.12
FOXC1Q12948 MIR3180-2-201ENST00000581748 88 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 AC048344.4-201ENST00000619744 527 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 AC005618.3-201ENST00000624928 458 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.33□□□□□ -0.12
FOXC1Q12948 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXC1Q12948 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 FAM90A7P-201ENST00000382628 1395 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 FAM90A23P-201ENST00000400136 1395 ntBASIC14.33□□□□□ -0.12
FOXC1Q12948 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.33□□□□□ -0.12
FOXC1Q12948 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FOXC1Q12948 AC090502.4-201ENST00000551714 1386 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms